Table 2.

Comparison of the DEPs identified in SEs of the OSCC-LNM group versus the OSCC-NLNM group

NumberAccession numberAbbreviationFull nameMolecular weight (kDa)Sequence lengthQ valueaScorebOSCC-LNM/OSCC-NLNMP valueExpression
1tr|A0A109PSY4|IGKV3D-7MS-A1 light-chain variable region (fragment)11.3761060.00049.6963.8740.0003564
2sp|P04040|CATCatalase59.7555270.00020.9162.5030.0193373
3sp|P04275|VWFvon Willebrand factor309.2628130.000157.0301.8070.0184345
4tr|V9GYE7|CFHR2Complement factor H-related protein 228.9122540.00024.4881.7620.0150898
5tr|B4DEF7|HSPA5cDNA FLJ60062, highly similar to 78 kDa glucose-regulated protein30.4192780.00029.6401.7020.0380467
6tr|A0A0 × 9V9C4|ENSG00000223931GCT-A8 heavy-chain variable region (fragment)13.2281200.00037.7721.6620.034641
7tr|B4DUV1|FBLN1Fibulin-170.1546410.000153.1901.6480.0107605
8sp|P80108|GPLD1Phosphatidylinositol-glycan–specific phospholipase D92.3358400.00017.9941.5760.0105536
9tr|F2RM37|F9Coagulation factor IX51.7444610.00025.6341.5560.0244641
10sp|Q03591|CFHR1Complement factor H-related protein 137.653300.000117.8001.5520.0057128
11tr|Q68DS3|CLEC3BUncharacterized protein DKFZp686H17246 (fragment)14.7081330.00071.1011.5170.0094758
12tr|Q6N030|ENSG00000223931Uncharacterized protein57.0195180.000323.3100.5950.0352034
13sp|P07360|C8GComplement component C8 gamma chain22.2772020.000121.6800.5870.0305837
14tr|A0A024R3E3|APOA1Apolipoprotein A-I, isoform CRA_a30.7772670.000323.3100.5390.0326735
15tr|A0A096LPE2|SAA4SAA2-SAA4 readthrough23.3532080.00033.3640.5190.0309882
16tr|D3JV41|CXCL7C-X-C motif chemokine (fragment)13.7081260.000156.4900.3400.0427637
17sp|P0DOX3|ENSG00000223931Immunoglobulin delta heavy chain56.2245120.000164.3800.2430.0377757
18tr|A0A140TA29|C4BComplement C4-B187.6616980.00063.4950.1660.0162487
19sp|A0A0C4DH39|ENSG00000223931Immunoglobulin heavy variable 1–5813.0051170.00310.683Only detected in OSCC-NLNM
20tr|A0A0F7T6Q1|ENSG00000223931IGHV1-2 protein (fragment)11.9111050.00078.857Only detected in OSCC-NLNM
21sp|P10720|PF4V1Platelet factor 4 variant11.5531040.00020.130Only detected in OSCC-NLNM
22tr|Q5NV70|IGKV3D-7V1-11 protein (fragment)10.333970.00018.509Only detected in OSCC-NLNM
23tr|Q8TCF0|LBPLBP protein52.9334770.00019.414Only detected in OSCC-NLNM
24tr|Q96SA9|IGKV3D-7Human anti-streptococcal/anti-myosin immunoglobulin kappa light-chain variable region (fragment)11.521070.00012.329Only detected in OSCC-NLNM
25tr|A0A0G2JRQ6|IGKV3D-7Uncharacterized protein (fragment)12.7481170.00311.523Only detected in OSCC-LNM
26tr|B2R6V9|F13A1cDNA, FLJ93141, highly similar to Homo sapiens coagulation factor XIII, A1 polypeptide (F13A1), mRNA83.247320.00017.861Only detected in OSCC-LNM
27tr|B2RA39|CFHR5cDNA, FLJ94686, highly similar to Homo sapiens complement factor H-related 5 (CFHL5), mRNA64.3915690.00013.285Only detected in OSCC-LNM
28tr|Q0ZCH1|ENSG00000223931Immunoglobulin heavy-chain variable region (fragment)12.8631180.00019.922Only detected in OSCC-LNM
  • aQ value, the probability that the protein is a false hit.

  • bScore, the sum of the scores of the individual peptides.