Table 1.

Summary of WES data statistics

Sample IDDNA sourceDNA amountAverage sequencing depth% bases covered by at least 20×Exome capture rateaPCR duplicate rateMapping%Mean insert size
PBCTNPLT001Whole blood3 μg11197.50.550.0899.7215
PBCTNPLT002Whole blood3 μg9396.20.570.0899.7206
PBCTNPLT003Whole blood3 μg9295.90.570.0699.7207
PBCTNPLT004Whole blood3 μg7094.00.550.0699.7216
PBCTNPLT005Whole blood3 μg7795.20.590.0399.7208
PBCTNPLT001Whole blood1 μg7494.30.420.3099.6207
PBCTNPLT002Whole blood1 μg9296.50.540.0899.7214
PBCTNPLT003Whole blood1 μg8895.60.550.0999.7212
PBCTNPLT004Whole blood1 μg7995.80.560.0699.7217
PBCTNPLT005Whole blood1 μg11198.00.560.0699.7209
PBCTNPLT001Whole blood0.2 μg6793.80.480.1299.2186
PBCTNPLT002Whole blood0.2 μg7594.80.510.0899.0185
PBCTNPLT003Whole blood0.2 μg7794.90.530.0799.0184
PBCTNPLT004Whole blood0.2 μg7494.90.510.0899.0182
PBCTNPLT005Whole blood0.2 μg7995.50.530.0998.9186
PBCTNPLT001Saliva1 μg7294.90.560.0899.1205
PBCTNPLT002Saliva1 μg7795.70.540.0599.4214
PBCTNPLT003Saliva1 μg9997.40.500.1398.2203
PBCTNPLT004Saliva1 μg7395.00.520.1097.7210
PBCTNPLT005Saliva1 μg6993.90.510.1298.5201
  • aThe exome capture rate is calculated as the sequenced bases in the capture regions divided by the length sum of all mapped reads.