Table 3.

Epigenetic and cytogenetic status of 6 selected colorectal cancer cell lines

Cell lineEpigenotyping by COBRA (this study)Epigenotyping by Yagi et al. (10)Epigenotyping by Hinoue et al. (9)Ploidy(32–35)Numerical abnormalities (±)(32–35)Translocations(32–35)Copy number changes(32–35)
DLD1HMEHMECIMP-highDiploid013
HTC116HMEHMECIMP-highNear-diploid154
HT29HMEN.DCIMP-highTriploid6820
CaCo2IMEIMECIMP-0Aneuploid1816N.D
SW480IMEIMECIMP-0Hyperdiploid61518
LOVOHMEHMEN.DNear-diploid314

Abbreviation: N.D., not defined