Haplotype code | X1 | X2 | X3 | X4 | Haplotype frequency* |
---|---|---|---|---|---|

H1 | A | G | T | T | 0.397 |

H2 | G | A | T | T | 0.214 |

H3 | G | G | C | T | 0.144 |

H4 | G | G | T | T | 0.127 |

H5 | A | G | T | G | 0.039 |

H6 | A | G | C | T | 0.028 |

H7 | G | A | T | G | 0.021 |

H8 | G | G | C | G | 0.016 |

H9 | G | G | T | G | 0.011 |

H10 | A | G | C | G | 0.004 |

Minor allele frequency | 0.47 | 0.23 | 0.19 | 0.09 | |

Base (major/minor allele) | G/A | G/A | T/C | T/G |

↵* Haplotype frequencies obtained from subset of 94 unrelated subjects were used to determine the empirical null distribution in PedGenie.