Table 3.

List of markers and deviations from Hardy-Weinberg equilibrium

dbSNP accessionLocationAfricanEuropeanIndigenous AmericanP-value for deviation from Hardy-Weinberg equilibriumExcess homozygotes
rs104260211q2100.470.050.950.64
rs107959811q23.10.060.140.630.595.39
rs1408641p34.30.110.010.550.00424.16
rs14602613q13.10.260.920.830.77−2.01
rs1638322q13.20.270.80.110.1018.89
rs172033p12.30.810.150.760.1217.72
rs180040415q13.10.140.720.480.901.35
rs180049811q23.10.140.650.090.507.55
rs19850807p14.30.10.640.970.871.39
rs198948619q13.420.040.580.40.901.43
rs20309617q21.330.650.720.280.94−0.92
rs20651601q32.10.50.920.170.2114.69
rs207786318p110.510.930.930.174.82
rs21617q22.10.440.30.62<0.00178.49
rs222847816q24.30.510.140.040.920.49
rs22383016q130.030.190.640.0323.96
rs23593621q21.30.180.490.370.409.83
rs26959q21.310.810.860.220.00334.80
rs27637p22.30.140.160.520.00927.92
rs28147781q23.200.990.990.0086.59
rs281617p1200.490.080.654.36
rs2858p21.30.970.520.450.27−12.84
rs286215q140.380.170.690.0226.98
rs289117p13.20.020.510.430.3510.94
rs31885191p34.10.760.370.320.940.84
rs318852020q11.220.830.350.440.694.31
rs32694611q23.10.610.170.07<0.00120.72
rs32872p16.10.730.20.210.831.73
rs33095q11.20.40.280.690.970.39
rs33175q23.10.050.590.730.1018.51
rs33405q33.20.060.190.650.00532.65
rs464615q21.20.320.290.720.2313.77
rs488419q13.320.150.290.860.419.77
rs5181169q33.30.130.670.580.87−1.78
rs5840593q22.30.490.140.470.456.95
rs59468911q110.090.470.130.012−26.01
rs60031q31.30.70.080.030.95−0.26
rs70414q13.30.930.410.450.0325.41
rs72209821q21.10.90.180.720.0225.91
rs7236321q32.30.10.920.670.356.54
rs734910p11.220.040.870.96<0.00115.36
rs73639414q32.120.520.740.990.0212.71
Rs9300725p13.20.960.10.450.871.67
Rs99417410q23.10.760.250.260.733.78
  • NOTE: The 3rd through 5th columns give the frequency of a reference allele frequency in each of the population (reference alleles are as described in Salari et al. (6)). The last column represents the difference between the number of observed individuals with homozygous genotypes subtracted from the number of individuals expected to have homozygous genotypes under Hardy-Weinberg equilibrium.