Serologic Autoantibodies as Diagnostic Cancer Biomarkers—A Review

SEREX

SEREX was first developed in 1995 (41, 42). This technique uses antibody reactivity with autologous cancer patient sera to identify immunogenic tumor proteins (17, 39). The cDNA expression library used in this methodology is constructed from tumor specimens of interest and then cloned into λ-phage expression vectors that are used to transfect Escherichia coli. The resulting recombinant proteins are then transferred onto a nitrocellulose membrane, which is incubated with diluted patient sera. Clones that are reactive with high-titer IgG antibodies are identified using an enzyme-conjugated secondary antibody specific for human IgG. The cDNA clone is sequenced and the autoantigen identified. The major advantage of using SEREX is the fact that it allows the identification of TAAs from in vivo material. Another advantage of this technology is that it allows the identification of several tumor-specific antigens in one experiment. Furthermore, both the tumor-specific antigen and its coding cDNA are present in the same plaque when immunoscreening is performed that allows the subsequent sequencing of matched cDNA immediately. The disadvantage of SEREX is the high likelihood of false-positive results. Second, the use of tumor tissue from a single patient with cancer followed by screening with autologous patient sera limits the identification of TAAs to that patient. Moreover, this complex methodology does not detect alternate tumor-associated PTMs of antigens (17). Patients may also exhibit autoimmunity to autologous proteins and therefore irrelevant non-cancer-associated proteins may be detected. Furthermore, parallel analysis with healthy donor sera as controls cannot be performed easily.

Phage display

Alternatively, a cDNA phage display library is constructed directly from tumor tissue or a cancer cell line derived from patient tumor material (43). Phage clones that bind to cancer sera are identified through a differential biopanning approach (44). Alternatively, a more cost-effective method is to construct the cDNA phage display library by expressing the phage proteins fused to the antigens on the surface of bacteriophages. The phage display method has the advantage of allowing the simultaneous screening of a large number of antigens against the sera of cancer patients relative to serum of healthy individuals (14, 43). The phage-display method has a higher throughput value than the SEREX method, but again, antigens with alternate PTMs cannot be detected using the phage-display method (19, 45).

Protein microarray

The protein array methods are advantageous in that they require only minute amounts of patient sera (46) while enabling the simultaneous screening of large numbers of antigens in a single test (47–52). In this methodology, purified or recombinant as well as synthetic proteins are used. Alternatively, fractured proteins of tumor origin are spotted onto the microarray platform. Arrays are then incubated with patient and control sera (17, 19, 53, 54). The array platform can be either two-dimensional (2D; such as nitrocellulose membranes, microtiter plates, or glass slides) or three-dimensional (3D; such as nanoparticles or beads). Although protein microarray methods are commonly used to analyze recombinant proteins expressed from Escherichia coli cells, alternatively, other host expression systems, such as yeast and insect cells, have been used to produce libraries presenting proteins with the correct PTMs. The disadvantage associated with this method is the requirement for high-quality protein synthesis (55). Furthermore, studies using protein microarrays are time restricted because of the short shelf-life of protein arrays (19, 56).

Reverse-capture microarray

In this method, the antibodies reacting with specific proteins are spotted onto the microarray. Similar to the protein microarray, the reverse-capture microarray is incubated with tumor lysate and serum proteins and the microarrays with captured proteins are then further incubated with sera from patients and controls. The autoantibodies are detected with fluorescent-labeled secondary antibody (57–59). The advantage of the utilization of “reverse-capture” microarray technology is the elimination of the need for recombinant proteins and allows the instant identification of cancer-specific autoantibodies. However, only known antigens and their commercially available antibodies can be analyzed and immunoreactivity with posttranslationally modified antigens cannot be differentiated unless antibodies that bind exclusively to these antigens are commercially available.

SERPA

SERPA (60) is also known as PROTEOMEX. This technique is very useful for detection of TAAs as it incorporates an effective separation of a complex mixture of proteins based on their isoelectric points and molecular weights through 2D electrophoresis and Western blotting followed by identification by mass spectrometry (19, 61, 62). Proteins from the tumor tissue of interest are transferred onto a nitrocellulose membrane and immobilized. The sera from patients with cancer and controls are separately screened using the immobilized proteins. The appropriate immunoreactive profiles are compared and the cancer-associated antigenic spots are identified by mass spectrometry. Similar to the SEREX technique, the advantage of the SERPA technique is the use of in vivo–derived TAAs. Furthermore, the SERPA technique allows for the identification of tumor-specific PTMs and isoforms but is limited in terms of the identification of low-abundance and transmembrane TAAs (17, 34, 51). SERPA also enables the easy parallel analysis of tumor proteins with healthy donor sera as controls and avoids the time-consuming construction of cDNA libraries, enabling this methodology to be completed within a few hours as compared with several days for SEREX and phage-display technology. However, due to the way that Western blot analyses are prepared, SERPA can only be used to detect linear epitopes (63).

MAPPing

The MAPPing methodology incorporates 2D immunoaffinity chromatography, which is followed by the identification of TAAs by tandem mass spectrometry analysis (64). In the first phase of the initial immunoaffinity chromatography, lysate from cancer cell lines or tumor tissue containing nonspecific TAAs is bound to IgG that was obtained from healthy controls in an immunoaffinity column. The flow-through fraction is then subjected to 2D immunoaffinity in a column that contains IgG from patients with cancer and columns can be used in parallel (65). The tumor antigens that are captured in the patient columns are eluted and digested for identification by nano-liquid chromatography mass spectrometry. MAPPing ensures that the tumor antigens are maintained in a solution that allows the potential identification of structural epitopes. The disadvantages associated with this method include the restriction of the tumor antigen identification to antibody interactions with a low dissociation rate constant. Furthermore, immunoprecipitation using these affinity columns limits the detection of tumor antigens in more complex protein solutions, such as cell lysate.

Prostate cancer

The prostate-specific antigen (PSA), also known as kallikrein 3 (KLK3), is part of a family of proteases that are known as kallikreins. These proteases are encoded by a cluster of genes that are located within a 300-kb region on chromosome 19q13.4 (67). PSA is responsible for the cleavage of the proteins seminogelin I and II, which leads to the liquefaction of the semen in seminal fluid (68). PSA activity is normally confined to prostatic glandular structures only, however, disturbances of this structure such as by formation of a tumor, may result in leakages of PSA into the circulatory system (69). The PSA blood test measures the amount of PSA within a patient's circulation. Any PSA level between 0 and 4 ng/mL is considered normal, whereas PSA levels between 4 and 10 ng/mL are slightly elevated, PSA levels between 10 an 20 ng/mL are moderately elevated, and any PSA levels above 20 ng/mL are highly elevated. A positive PSA serum level above 4 ng/mL concentration has diagnostic potential in patients with prostate cancer (70).

Although PSA serum levels are the most commonly used diagnostic test for this cancer to date, its specificity is less than 50%, resulting in frequent false-positive results (71). The primary limitation of the use of PSA as a diagnostic biomarker is the inability to distinguish between benign and malignant stages of the disease (72). Increased PSA serum levels may also arise due to noncancerous conditions such as enlargement of the prostate, prostatitis, and urinary infection (69). Xie and colleagues (73) developed a new multiplex assay that they termed the “A+PSA” assay (the autoantibody+PSA assay). This assay used B-cell epitopes from previously defined prostate cancer–associated antigen (PCAA), including New York esophageal squamous cell carcinoma (NY-ESO-1), synovial sarcoma X breakpoint 2,4 (SSX-2,4), X antigen family member 1B (XAGE-1b), lens epithelium–derived growth factor (LEDGF), transferrin receptor protein 9 (p90), and α-methylacyl-CoA racemase (AMACR). The platform allowed the simultaneous screening of these six autoantibodies alongside PSA, and PSA screening alone in 131 patients with presurgery biopsy confirmed prostate cancer and 121 patients with prostatitis and/or benign prostatic hyperplasia. The overall aim of this research was to develop a reliable platform that will enable the diagnosis of patients with prostate cancer relative to nonmalignant cases. Xie and colleagues (73) found that PSA alone had a sensitivity of 52% and specificity of 79% in all patients, whereas the A+PSA platforms showed a sensitivity of 79% and a specificity of 84% in all patients. The A+PSA platform also had a decreased false-positive outcome of only 16% versus 21% when PSA alone was used. Overall, the accuracy of the A+PSA test platform was as high as 81%, whereas PSA alone only showed an accuracy of 65%. Wang and colleagues (14) used phage protein microarray technology and 119 prostate cancer patient sera and 138 healthy control sera to identify increased autoantibody levels of bromodomain-containing protein 2 (BRD2), eukaryotic translation initiation factor 4 γ 1 (eIF4G1), ribosomal protein L22 (RPL22), ribosomal protein LBa (RPL13a), and hypothetical protein XP_373908 (XP_373908) as the antigens most frequently bound to autoantibodies in prostate cancer patient serum. This microarray displayed 81.6% sensitivity and 88.2% specificity. Except for hypothetical protein XP_373908, these structures are derived from intracellular proteins involved in regulating either transcription or translation and closely resembled autologous proteins. However, when tested, their DNA sequences were not identical to those of genes encoding for autologous proteins (14). Moreover, the autoantibody signature was detected in only five of 14 serum samples from patients who had undergone prostatectomy and in three of 11 serum samples from patients with hormone-refractory disease, suggesting that the autoantibody profile is attenuated on removal of the “immunogen” or after treatment with antiandrogen chemotherapeutic agents, or both. Taken together, these results provide evidence that the above-mentioned autoantibodies are associated with the presence of this cancer (14). A more recent microarray study, which aimed to identify an autoantibody signature to distinguish prostate cancer from benign prostatic hyperplasia in patients who showed increased PSA levels, displayed a sensitivity of 95% and 80% specificity compared with 12.2% sensitivity and 80% specificity of PSA alone. This microarray, tested against the sera of 41 patients with prostate cancer and 39 patients with benign prostate hyperplasia, identified talin-1 (TLN1), TAR DNA-binding protein (TARDBP), LEDGF, Caldesmon (CALD1) and Parkinson disease (autosomal recessive, early onset) 7 oncogene (PARK7) as potential diagnostic autoantibody signature (74).

Breast cancer

Biomarkers such as carcinoma antigen 15-3 (CA 15-3), carcinoma antigen 27–29 (CA 27–29), and carcinoembryonic antigen (CEA) have been accepted for clinical use; however, due to their low sensitivity and specificity they are suggested to be used for the diagnosis of more advanced stages rather than for the early diagnosis of breast cancer (75). In terms of autoantibody biomarkers, antibodies to HER2 (76), tumor protein 53 (p53; ref. 77), Mucin 1, cell surface associated (MUC1; ref. 78), and NY-ESO-1 (79) were first discovered in patients with breast cancer. In fact, antibodies to HER2/neu (76) have been detected in patients with early-stage breast cancer but their presence has also been detected in other cancers, limiting their use as a diagnostic biomarker for breast cancer alone (28, 30, 80). An increase to 44% sensitivity and 97.6% specificity in breast cancer detection was achieved through the successive addition of the three TAAs p53, protein 16 (p16), and avian myelocytomatosis viral oncogene homolog (c-myc; ref. 81). SEREX technology was used by Zhong and colleagues (82) to detect three further breast cancer–associated autoantibodies including serine active site containing 1 (SERAC1), receptor expressed in lymphoid tissues (RELT), and ankyrin repeat and suppressor of cytokine signaling (SOCS) box protein 9 (ASB-9). The combined panel of these three biomarkers achieved 77% sensitivity and 82.8% specificity when tested against 87 patients with breast cancer and 87 healthy control sera (82). The SERPA approach was used by Desmetz and colleagues (83) who have identified HSP60 autoantibodies in a cohort consisting of 49 patients with ductal carcinoma in situ (DCIS), 58 patients with early-stage breast cancer, 20 patients with other types of cancer, 20 patients with various autoimmune diseases, and 93 healthy controls and the sensitivity of HSP60 autoantibodies as a potential biomarker for the diagnosis of breast cancer was calculated to be 31.8%, whereas its specificity is 95.7%. A study by Chapman and colleagues (84) with a cohort of 94 healthy controls, 97 primary breast cancer sera, and 40 DCIS sera tested for seven antigens, including HER2, c-myc, p53, breast cancer type I susceptibility protein (BRCA1), breast cancer type II susceptibility protein (BRCA2), Ny-ESO-1, and MUC1. The specificity of the assay was found to be as high as 91% to 98%, even when tested for individual markers only; however, the individual autoantigen assay sensitivity was only 3% to 23% in the DCIS sera and 8% to 24% in the primary breast cancer sera. On comparison, the sensitivity increased to 45% in DCIS sera and 64% in primary cancer sera with a specificity of 85% when a combined panel of six of seven autoantigens was tested, which alongside other cancer detection methods, such as mammography, may lead to a significant improvement in breast cancer detection. A study by Hamrita and colleagues (85) used the SERPA method to test sera from patients with more invasive breast cancer. The study found HSP60 autoantibodies in 47.5% of patients with breast cancer and in only 4.7% of healthy control sera. α-2-HS-glycoprotein (AHSG) autoantibodies have also been identified in 79.1% of 81 breast cancer patient samples and only in 9.6% of 73 control samples; however, the diagnostic relevance of these autoantibodies remains to be validated (80).

Lung cancer

Lung cancer is notoriously heterogeneous and therefore no diagnostic test for the early detection of this cancer has been established (86).

A study by Pereira-Faca and colleagues (87) used one-dimensional and 2D electrophoresis as well as Western blotting and mass spectrometry to identify the 14-3-3 Θ autoantibody as a potential biomarker for the early-stage diagnosis of lung cancer in a cohort consisting of 45 patients with newly diagnosed lung cancer, 18 patients with prediagnostic lung cancer, and 62 matched healthy controls. This 14-3-3 Θ autoantibody was tested in a panel alongside autoantibodies to PGP 9.5 and annexin I, and together these displayed a sensitivity of 55% and specificity of 95%. Furthermore, reactivity to laminin receptor 1 (LAMR1) has also shown high reactivity to lung cancer patient sera (88). This protein microarray study by Qiu and colleagues tested 85 patients with prediagnostic lung cancer and 85 matched healthy controls against 14-3-3 Θ, LAMR1, and annexin I and achieved a sensitivity of 51% and a specificity of 82% (88). Yang and colleagues (89) analyzed a study cohort consisting of 40 patients with newly diagnosed lung squamous carcinoma, 30 patients with various other types of cancer, and 50 healthy controls and performed 2D electrophoresis (2D-PAGE) and an ELISA to identify triose-phosphate isomerase (TPI) and mitochondrial superoxide dismutase 2 (MnSOD) autoantibodies as potential early-stage lung cancer diagnostic biomarkers with a sensitivity of 47% and a specificity of 90%. Furthermore, research by He and colleagues (90), used a combination of methods including 2D-PAGE, Western blotting, mass spectrometry, and ELISA to identify further reactivity and therefore autoantibody production to α-enolase1 (α-enolase) in 28% of patients with lung cancer. When α-enolase was used in combination with other potential autoantibody biomarkers such as CEA and cytokeratin fragment 21-1 (CYFRA 21-1) in a cohort of 94 patients with non–small cell lung cancer, 15 patients with small cell lung cancer, 10 patients with gastric cancer, 8 patients with colon cancer, 9 patients with Myobacterium avium complex infection of the lung, and 60 healthy controls, the sensitivity of this potential diagnostic lung cancer biomarker panel was calculated to be as high as 69.3% with a specificity 98.3% (90). An ELISA panel of potential diagnostic lung cancer autoantibody biomarkers composed of p53, c-myc, Her-2, NY-ESO-1, MUC1, cancer antigen 1 (CAGE), and TAA GBU4-5 (GBU4-5) tested by Chapman and colleagues yielded promising results of 76% sensitivity and 92% specificity in another cohort consisting of 82 patients with non–small cell lung cancer, 22 patients with small cell lung cancer, and 50 healthy controls (91).

Colon cancer

To date, CEA is the only serologic biomarker in clinical use for the diagnosis of colorectal cancer; however, this biomarker is also hindered by its low specificity and sensitivity (92). A study by Liu and colleagues (92) showed an increase in colon cancer detection sensitivity over CEA when an ELISA-based mini-array containing five TAAs, IMP dehydrogenase 1 (Imp1), nucleoporin p62 (p62), K homology domain containing protein over expressed in cancer (Koc), p53, and c-myc, was used. When 46 patients with colon cancer and 58 healthy controls were probed with the above-mentioned mini-array, the sensitivity for the combined panel was 82.6% and its specificity was 89.7% in the patients with colon cancer (92). Autoantibodies to the FAS receptor (Fas/CD95; ref. 93) also show specificity for the early detection of colon cancer. Reipert and colleagues (93) investigated sera from 38 healthy controls, 38 patients with colorectal adenomas, and 21 patients with colorectal adenocarcinoma in their ELISA-based array for reactivity against Fas and did not detect any reactivity with Fas in the sera of healthy controls. Furthermore, the anti-Fas antibody titers were higher in patients with colorectal adenomas compared with colorectal adenocarcinoma patient anti-Fas titers resulting in sensitivity and specificity of this array of 17% and 100% for colon cancer, respectively (93), making this biomarker a good option to confirm negative disease status but not to confirm positive disease status, and thus the search for colon cancer biomarkers is still ongoing. Another marker called Mucin-5AC (MUC5AC), was investigated to increase sensitivity of colon cancer detection. This ELISA-based experiment was performed on 20 patients with colorectal polyps, 30 patients with colorectal cancer, and 22 healthy volunteers and its sensitivity was found to be 54%, however, this marker exhibited a much lower specificity than Fas of 73% (94). Studies have shown that autoantibodies to p53 can help identify individuals at increased risk of developing colorectal cancer as these autoantibodies have been detected in patients with precancerous colorectal cancer lesions. In fact, the screening for these autoantibodies is suggested in addition to colonoscopy screens (95–97). However, antibodies to p53 have also been associated with a range of other cancers, which reduces the specificity of this biomarker for colon cancer.

Another study by He and colleagues (98) has shown increased levels of autoantibodies to HSP60 in the sera of 13 of 25 patients with colorectal cancer relative to one of 15 healthy volunteer sera, which results in 52% sensitivity and 93.3% specificity of this marker for colon cancer diagnosis; however, the same autoantibodies have also been observed in patients with breast cancer, which demonstrates that this biomarker is not specific to colon cancer alone (98). Research by Chen and colleagues (99) investigating the reactivity to nucleobindin 1 (Calnuc) in sera from 52 patients with colon cancer, 39 patients with breast cancer, 16 patients with cervical cancer, 70 patients with esophageal cancer, 73 patients with gastric cancer, 62 patients with hepatic cancer, 104 patients with lung cancer, 14 patients with nasopharyngeal cancer, 17 patients with ovarian cancer, and 82 healthy controls showed no significantly higher Calnuc frequency in various cancer groups (4.7%) to healthy individuals (1.2%). When patients with colon cancer were investigated, Calnuc frequency was detected to be 11.5% in patients, which is significantly higher than the frequency mentioned in controls. The same study achieved an increase to 65.4% sensitivity and 93.9% specificity when Calnuc was added to a TAA panel composed of c-myc, p53, G₂/mitotic-specific cyclin-B1 (CCNB1), and G₁–S–specific cyclin-D1 (CCND1; ref. 99).

Stomach cancer

To date, there are no stomach cancer–specific biomarkers although p53 autoantibodies have been identified as being associated with stomach cancer as well as several other cancers (100, 101). Previously, Shimizu and colleagues (101) tested the sera of 40 patients with gastric cancer after gastric resection for the presence of p53, CEA, and CA 19-9 autoantibodies. This ELISA-based assay showed that 15% of the patients were positive for p53 autoantibody but not for CEA or CA 19-9 and 17.5% were positive for CEA only while 10% were positive for CA 19-9 (101). Patients seemed to express either p53 autoantibodies or CEA and CA 19-9 autoantibodies. When all three markers were applied as a panel, a panel sensitivity of 42.5% was achieved, which was deemed too low for the panel to be used in the diagnosis of gastric cancer (101). Three years later, Qiu and colleagues (100) tested 61 preoperative patients with gastric carcinoma and 30 patients with other gastric diseases including 10 patients with gastritis, 10 patients with gastric ulcers, and 10 patients with gastro spasm against a combined panel of CEA and p53 autoantibodies. This panel showed positive reactivity for these two markers in 31 of 61 gastric carcinoma patient sera, indicating a sensitivity of 50.8%, but did not show positive reactivity with sera from any of the other gastric diseases (100). Although this panel yielded higher sensitivity, it is important to keep in mind that this panel was tested against preoperative gastric cancer patients while Shimizu and colleagues (101) tested postgastric resection patients, suggesting once more that the autoantibody profile could have been attenuated on removal of the “immunogen” after treatment. The GastroPanel, used to detect gastric mucosa variations including atrophic gastritis, incorporates the biomarkers serum pepsinogen I (PGA1) and serum pepsinogen II (PGA2), gastrin-17 as well as antibodies against Helicobacter pylori. Because most stomach cancers arise from chronic inflammations such as gastritis (102), GastroPanel may aid in the early-stage diagnosis of the cancer or may also aid in the identification of individuals who may be at increased risk of developing stomach cancer once inflammation of their gastric mucosal wall has been confirmed.

Liver cancer

Hepatocellular carcinoma (HCC), the predominant form of primary liver cancer, is diagnosed by the histologic examination of the liver using ultrasonography (103). Although this technology displays a sensitivity of 60% to 80%, a positive predictive value of 78% and a specificity of up to 98% (104), it is nonetheless subject to detection bias as it is an operator-dependent technology and small tumors may be overlooked against a cirrhotic background (105, 106). Therefore, there is a need to support the diagnosis of this cancer on a more molecular level. The search for autoantibodies for the diagnosis of the cancer is therefore of great interest to develop a blood test for hepatocellular carcinoma diagnosis.

α-fetoprotein (AFP), a normal serum protein synthesized during embryonic development, is currently considered to be the best biomarker available for hepatocellular carcinoma diagnosis (107). Elevated levels of AFP are observed in pregnant woman and chronic liver disease patients; however, lower levels of this biomarker are also observed in healthy individuals and nonpregnant woman, implying that AFP cannot be used for the diagnosis of small hepatocellular carcinoma tumors (108). The sensitivity of the biomarker lies between 40% and 65% and its specificity between 75% and 90% while displaying a positive predictive value of only 12% (109). One major study by Zhang and colleagues (110) was performed in China to measure whether a combination of routine ultrasonography screening and an ELISA-based AFP test (cutoff value at 20 μg/L) increases hepatocellular carcinoma detection rates. Out of the 18,816 people with hepatitis B virus (HBV) infection included in this study, 9,373 were randomly selected to be part of the screening group, which was offered an ultrasonography examination and an AFP test combination every 6 months for a period of up to 5 years and the remaining 9,443 people were randomly selected to be part of the control group, which did not receive any extra screening but continued to use health care facilities (110). During this study, 71 cases of hepatocellular carcinoma were detected in the screening group compared with 67 in the control group (110), but this slight increase was not considered to be sufficient evidence to support further use of AFP testing in combination with routine ultrasonography examination and therefore routine ultrasonography examination alone is used during clinical practice (107). In 2006, Farinati and colleagues (109) tested 1,158 patients with hepatocellular carcinoma for AFP levels in their ELISA-based test. AFP levels less than 20 ng/mL were considered normal, whereas 21 to 400 ng/mL were defined as elevated and more than 400 ng/mL were considered as diagnostically significant. With regards to these levels, the group confirmed the low sensitivity of AFP as 54% and did not recommend this marker for utilization in the routine diagnosis of hepatocellular carcinoma (109). Serum levels of des-γ-carboxyprothrombin (DCP), another potential biomarker for hepatocellular carcinoma diagnosis, have been compared with AFP levels in an ELISA-based experiment performed by Marrero and colleagues (111). This research tested sera from 48 healthy controls, 51 patients with noncirrhotic hepatitis, 53 patients with compensated cirrhosis, and 55 patients with hepatocellular carcinoma against DCP and AFP individually and in combination to find the best marker or panel to differentiate patients with hepatocellular carcinoma from other patients with nonmalignant chronic liver disease. The study concluded that the sensitivity and specificity of AFP levels alone are 77% and 73%, and of DCP are 89% and 95%, respectively, and the combination of the two markers resulted in 88% and 95% sensitivity and specificity (111).

The utilization of SEREX methodology showed the presence of hepatocellular carcinoma–associated antigen HCC-22-5 (HCC-22-5) autoantibodies in 78.9% patients with liver cancer who were diagnosed as AFP-negative and these autoantibodies were not detected in healthy control sera nor in the sera of patients with lung or gastrointestinal cancer (112). In another SEREX-based study, Takashima and colleagues (113) tested 15 patients with hepatocellular carcinoma and 20 healthy control sera against glyceraldehyde-3-phosphate dehydrogenase (GAPDH), HSP70, MnSOD, and peroxiredoxin (Prx) and found that high GAPDH autoantibody levels were present in 33.3% of patients and in 35% of controls, indicating that routine use of GAPDH for hepatocellular carcinoma diagnosis is not recommended, whereas high HSP70 levels were detected in 46.7% of patients and in only 10% of controls (113). In the same study, high serologic autoantibody levels of MnSOD were detected in 40% of patient sera and in only 10% of controls, whereas high PRX autoantibody levels were detected in 33.3% of patients and 0% of controls (113).

Chronic HBV infection and cirrhosis are high-risk factors for the development of hepatocellular carcinoma and TAA autoantibodies can be found in patients with HBV-associated hepatocellular carcinoma (107, 114). SERPA and protein microarray studies have found autoantibodies to proteins, including EEF2, heterogeneous nuclear ribonucleoprotein A2 (hnRNP A2), DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked (DDX3X), apoptosis inducing factor (AIF), prostatic binding protein (PBP), and TIP to be significantly higher in patients with hepatocellular carcinoma than in healthy individuals or patients with chronic hepatitis. The sensitivity of any of the four markers: DDX3X, PBP, EEF2, and AIF was found to be 50% to 85% and increased to 90% when analyzed as a biomarker panel (115).