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Cancer Epidemiology, Biomarkers & Prevention
Cancer Epidemiology, Biomarkers & Prevention
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Research Articles

Human Papillomavirus Genotypes in Cervical Intraepithelial Neoplasia Grade 3

Philip E. Castle, Mark Schiffman, Cosette M. Wheeler, Nicolas Wentzensen and Patti E. Gravitt
Philip E. Castle
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Mark Schiffman
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Cosette M. Wheeler
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Nicolas Wentzensen
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Patti E. Gravitt
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DOI: 10.1158/1055-9965.EPI-10-0251 Published July 2010
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Tables

  • Table 1.

    HPV genotypes detected by line blot assay, linear array, and either line blot assay or linear array, for all and single HPV genotypes in cervical specimens from women diagnosed with CIN3

    Line blot assay (n = 596)Linear array (n = 588)Line blot assay or linear array
    All (n = 608)Single (n = 128)
    %%%%
    Any HPV96.098.198.9100
    Any carcinogenic HPV92.194.495.489.8
    Multiple HPV genotypes64.777.277.8
    Multiple carcinogenic HPV genotypes51.361.360.0
    HPV62.04.34.41.6
    HPV111.01.71.60.0
    HPV1656.558.859.947.7
    HPV1811.212.413.27.0
    HPV261.01.71.80.8
    HPV3114.817.018.110.9
    HPV337.78.810.03.9
    HPV359.28.89.44.7
    HPV397.710.210.50.8
    HPV401.51.92.10.0
    HPV423.05.45.60.8
    HPV456.78.38.42.3
    HPV5110.113.414.00.8
    HPV52*14.823.5†14.85.5
    HPV537.111.111.20.0
    HPV546.79.710.00.0
    HPV553.95.45.40.8
    HPV565.07.07.20.8
    HPV570.2n/a0.20.0
    HPV587.99.79.95.5
    HPV596.08.38.10.0
    HPV61‡4.57.16.90.0
    HPV62‡5.29.29.10.8
    HPV64‡0.50.00.30.0
    HPV663.96.16.32.3
    HPV67‡2.92.43.01.6
    HPV683.54.64.60.0
    HPV69‡0.91.01.00.0
    HPV70‡4.84.34.90.0
    HPV71‡1.40.71.20.0
    HPV72‡2.02.22.50.0
    HPV732.53.23.30.0
    HPV81‡2.54.14.00.8
    HPV823.53.73.60.8
    HPV82v‡0.00.50.50.0
    HPV834.76.06.30.0
    HPV843.48.08.20.0
    HPV89‡4.36.16.40.0
    • ↵*HPV52 for line blot assay or linear array was based only on the line blot assay result because of the tendency of linear array to overestimate the presence of HPV52.

    • ↵†Inferred based on testing positive for a pool of probes.

    • ↵‡These HPV genotypes were not detected in all enrollment specimens tested by line blot assay.

  • Table 2.

    Characteristics of CIN3 by hierarchically defined HPV risk group: HPV16 > other carcinogenic HPV genotypes (Carc. excl. HPV16) > noncarcinogenic HPV > PCR negative

    Characteristics at diagnosisn (%)HPV16Carc. (excl. HPV16)NoncarcinogenicPCR negativeP
    n = 364n = 216n = 21n = 7
    Median age (y)608 (100)23.52524400.0003
    n (%)Row %Row %Row %Row %
    Second diagnosis
        <CIN242 (7)3648107<0.0005
        CIN2236 (39)534241
        CIN3330 (54)682920
    Smoking status
        Never247 (41)5541320.005
        Former80 (13)543944
        Current281 (46)663040
    Oral contraceptive use
        Never156 (26)5640310.04
        Former127 (21)583460
        Current273 (45)663220
        Missing52 (9)444660
    Parity
        Never pregnant162 (27)6729400.03
        0 births76 (13)663310
        1 birth159 (26)603731
        ≥2 births211 (35)524053
    Worst cytologic interpretation
        Negative45 (7)4042117<0.0005
        ASCUS70 (12)543664
        LSIL107 (18)633521
        HSIL/ASC-H385 (63)633530
    Study arm
        Immediate colposcopy227 (37)5735620.1
        HPV triage163 (27)603821
        Conservative management218 (36)633421

    Abbreviations: HSIL, high-grade squamous intraepithelial lesion; ASC-H, atypical squamous cells, cannot rule out HSIL.

    • Table 3.

      Logistic regression model for detecting HPV16 versus other carcinogenic HPV genotypes in cervical specimens from women diagnosed with CIN3

      Characteristics at diagnosisn (%)OR (95% CI)P
      Age (per year)580 (100)0.97 (0.94-1.0)0.04
      Second diagnosis
          <CIN2 (ref.)35 (6)1.0 (—)
          CIN2224 (39)1.8 (0.85-3.8)0.1
          CIN3321 (55)3.1 (1.5-6.4)0.003
      Parity
          Never pregnant (ref.)156 (27)1.0 (—)
          0 births75 (13)0.95 (0.52-1.7)0.9
          1 birth154 (27)0.69 (0.43-1.1)0.1
          ≥2 births195 (34)0.57 (0.35-0.93)0.03
      Smoking status
          Never (ref.)236 (41)1.0 (—)
          Former74 (13)1.0 (0.59-1.8)0.9
          Current270 (47)1.7 (1.2-2.5)0.005

      NOTE: Odds ratios are mutually adjusted for all variables in the table.

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      Cancer Epidemiology Biomarkers & Prevention: 19 (7)
      July 2010
      Volume 19, Issue 7
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      Human Papillomavirus Genotypes in Cervical Intraepithelial Neoplasia Grade 3
      Philip E. Castle, Mark Schiffman, Cosette M. Wheeler, Nicolas Wentzensen and Patti E. Gravitt
      Cancer Epidemiol Biomarkers Prev July 1 2010 (19) (7) 1675-1681; DOI: 10.1158/1055-9965.EPI-10-0251

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      Human Papillomavirus Genotypes in Cervical Intraepithelial Neoplasia Grade 3
      Philip E. Castle, Mark Schiffman, Cosette M. Wheeler, Nicolas Wentzensen and Patti E. Gravitt
      Cancer Epidemiol Biomarkers Prev July 1 2010 (19) (7) 1675-1681; DOI: 10.1158/1055-9965.EPI-10-0251
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