Table 3.

Posterior distribution summaries for causal minor allele frequencies, estimated from 100,000 MCMC samples

BandGeneMarker SNPMarker MAFMedianMode95% CIPr(<5%)Pr(<1%)
(Prior)0.0630.0010−5–0.460.460.27
1p11rs112494330.390.230.060.021–0.480.0930.0060
2q35rs133870420.490.280.250.069–0.490.0071<10−5
3p22SLC4A7rs49737680.460.300.310.097–0.490.0017<10−5
5p12rs109416790.250.260.070.023–0.490.0670.0034
5q11MAP3K1rs8893120.380.250.210.045–0.490.032<10−5
6q25rs20462100.340.160.020.0055–0.480.220.051
10q25FGFR2rs29815820.380.400.480.21–0.49<10−5<10−5
11p15LSP1rs38171980.30.160.030.0074–0.480.230.038
16q12TOX3rs38036620.250.290.380.084–0.490.0018<10−5
17q22COX11rs65049500.270.0510.020.013–0.460.490.0033

NOTE: Pr[<5% (1%)], probability that causal allele frequency is less than 5% (1%).

Abbreviation: CI, credible interval.