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1 Departments of Laboratory Medicine and Pathology, 2 Medical Genetics, and 3 Health Sciences Research, Mayo Clinic College of Medicine, Rochester, Minnesota; 4 Unité Mixte de Génétique Constitutionnelle des Cancers Fréquents, Hospices Civils de Lyon-Centre Léon Bérard; 5 IARC, Lyon, France; 6 Institut National de la Sante et de la Recherche Medicale U509, Service de Génétique Oncologique, Institut Curie, Paris, France; 7 Centre François Baclesse, Caen, France; 8 Cancer Research UK, Genetic Epidemiology Unit, Department of Public Health and Primary Care and 9 Cancer Research UK, Human Cancer Genetics Group, Department of Oncology, University of Cambridge, Cambridge, United Kingdom; 10 South West Thames Regional Genetics Service, St. Georges Hospital, London, United Kingdom; 11 Northern Ireland Regional Genetics Centre, Cancer Genetics Service, Belfast City Hospital, Belfast, United Kingdom; 12 South East of Scotland Clinical Genetics Service, Western General Hospital, Edinburgh, United Kingdom; 13 Department of Genetics and Pathology, Pomeranian Medical University, Szczecin, Poland; 14 Queensland Institute of Medical Research, Brisbane, Queensland, Australia; 15 The Kathleen Cuningham Foundation Consortium for Research into Familial Breast Cancer, Peter MacCallum Cancer Centre, Melbourne, Victoria, Australia; 16 Division of Molecular Gyneco-Oncology, University of Cologne, Cologne, Germany; 17 Institute for Medical Informatics, Statistics and Epidemiology, University of Leipzig, Leipzig, Germany; 18 Department of Gynaecology and Obstetrics, Technical University, Munich, Germany; 19 Institute of Human Genetics, University of Heidelberg; 20 Deutsches Krebsforschungszentrum Heidelberg, Heidelberg, Germany; 21 Institute of Human Genetics, University of Muenster, Muenster, Germany; 22 Institute of Human Genetics, University of Frankfurt, Frankfurt, Germany; 23 Clinical Genetics Service, Memorial Sloan-Kettering Cancer Center, New York, New York; 24 Fred A. Litwin Center for Cancer Genetics, Samuel Lunenfeld Research Institute, Mount Sinai Hospital; 25 Ontario Cancer Genetics Network, Cancer Care Ontario; 26 Centre for Research in Women's Health, Toronto, Ontario, Canada; 27 Department of Human Genetics, Leiden University Medical Center; 28 The Foundation for the Detection of Hereditary Tumors, Leiden, the Netherlands; 29 Department of Oncology, Lund University Hospital, Lund, Sweden; 30 Clinical Genetics Branch and 31 Laboratory of Population Genetics, National Cancer Institute, NIH, Bethesda, Maryland; 32 Division of Epidemiology, Department of Medicine, University of California Irvine, Irvine, California; 33 Abramson Cancer Center, University of Pennsylvania School of Medicine; 34 Fox Chase Cancer Center, Philadelphia, Pennsylvania; 35 Division of Senology, Medical University of Vienna, Vienna, Austria; 36 Dana-Farber Cancer Institute, Boston, Massachusetts; 37 Department of Biochemistry and Experimental Oncology, First Faculty of Medicine, Charles University, Prague, Czech Republic; 38 Department of Cancer Epidemiology and Genetics, Masaryk Memorial Cancer Institute, Brno, Czech Republic; 39 Division of Cancer Prevention and Control, H. Lee Moffitt Cancer Center and Research Institute, Tampa, Florida; Departments of 40 Obstetrics and Gynecology and 41 Clinical Genetics, Helsinki University Central Hospital, Helsinki, Finland; 42 Cancer Genomics Laboratory, Oncology and Molecular Endocrinology Research Centre, Centre Hospitalier Universitaire de Québec and Laval University, Quebec City, Quebec, Canada; 43 Department of Preventive Medicine and Public Health, Creighton University, Omaha, Nebraska; 44 Lombardi Cancer Center, Georgetown University, Washington, District of Columbia; 45 City of Hope Cancer Center, Duarte, California; 46 University of Chicago, Chicago, Illinois; and 47 University of Texas Southwestern Medical Center at Dallas, Dallas, Texas
Requests for reprints: Fergus J. Couch, Mayo Clinic College of Medicine, 200 First Street Southwest, Rochester, MN 55905. Phone: 507-284-3623; Fax: 507-266-0824. E-mail: Couch.fergus{at}mayo.edu
| Abstract |
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| Introduction |
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Further evidence for a role of AURKA in breast cancer comes from observations that homozygosity for a F31I polymorphism in AURKA is associated with an increased risk for breast cancer. In a study of incident breast cancer cases (n = 941) and age-matched population controls (n = 830), Egan et al. (3) found that the breast cancer risk for Ile/Ile homozygotes were at increased risk for breast cancer [odds ratio (OR), 1.54; 95% confidence interval (95% CI), 0.96-2.47], although this finding was not significant. Sun et al. (4) observed that the Ile-encoding allele is the common allele in the Chinese population, whereas the Phe-encoding allele is more common in Caucasian populations (4). In addition, an association between Ile/Ile homozygotes and estrogen receptornegative breast carcinomas (OR, 2.56; 95% CI, 1.24-5.26) was detected. Lo et al. (5) reported a significant association between AURKA haplotypes and breast cancer risk. Ewart-Toland et al. (6) also found an increase in cancer risk for the Ile/Ile homozygotes (OR, 1.35; 95% CI, 1.12-1.64; P = 0.002) in a meta-analysis of data from four case-control breast cancer populations. Furthermore, postmenopausal women homozygous for the F31I and I57V alleles of AURKA in a case-control study nested within the Nurses' Health Study prospective cohort had an increased risk of invasive breast cancer (OR, 1.63; 95% CI, 1.08-2.45; ref. 7). In contrast, Dai et al. (8) did not observe a significant association with breast cancer risk for Ile/Ile homozygotes (OR, 1.2; 95% CI, 0.9-1.6) in a population-based case-control series of Han Chinese, and Fletcher et al. (9) found no association between Ile/Ile homozygotes and risk of bilateral breast cancer (OR, 0.63; 95% CI, 0.34-1.13). Importantly, the F31I variant has been shown to alter the activity of the Aurora box-1 of the AURKA protein, resulting in disruption of p53 binding and a decreased rate of degradation of AURKA. The stabilized AURKA may lead to centrosome amplification and failure of cytokinesis, increased chromosomal instability and aneuploidy, and promotion of tumor formation (1).
Mutations in BRCA1 and BRCA2 are correlated with aberrant duplication of the centrosome leading to centrosome amplification, chromosome missegregation, and aneuploidy (10-12). Amplification of AURKA has also been detected at much higher frequency in tumors from BRCA1 and BRCA2 mutation carriers than in sporadic breast tumors, suggesting that overexpression of AURKA and inactivation of BRCA1 and BRCA2 cooperate during tumor development and/or progression. Based on these data, we hypothesized that the F31I polymorphism modifies the risk of breast cancer in BRCA1 and BRCA2 mutation carriers. To address this hypothesis, AURKA F31I was genotyped on BRCA1 and BRCA2 deleterious mutation carriers from 16 clinic and population-based research studies and multicenter consortia participating in the Consortium of Investigators of Modifiers of BRCA1/2 (CIMBA) and the association of F31I with breast cancer risk was assessed.
| Materials and Methods |
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Genotyping
The F31I polymorphism (rs2273535) of AURKA was genotyped by 13 groups by the 5' nuclease assay (Taqman) on an ABI 7900HT Sequence Detection System (Applied Biosystems). PCR primers were 5'-CTGGCCACTATTTACAGGTAATGGA-3' (forward) and 5'-TGGAGGTCCAAAACGTGTTCTC-3' (reverse). Probes were VIC-ACTCAGCAATTTCCTT and FAM-CTCAGCAAATTCCTT. The annealing temperature was 60°C. Lund investigators used an alternative reverse primer (CATCTTTTGCTTTCATGAATGCCAG) and did the 5' nuclease assay on a RotorGene (Corbett Research). INHERIT investigators directly sequenced the polymorphism using the following primers: 5'-GGGTGAGGAATTGGAGGGGAT-3' (forward) and 5'-GGACACCAATTTATGCTGTGTCCT-3' (reverse). Genotyping for the HEBCS was done by Amplifluor fluorescent genotyping (KBioscience).48 Genotyping for the DKFZ and Polish studies was done by fragment analysis. DNA fragments containing the polymorphism were amplified using forward primer 5'-AGTTGGAGGTCCAAAACGTG-3' and Cy5-labeled reverse primer 5'-CGCTGGGAAGTATTTGAAGG-3', digested with 2.5 units XapI (Fermentas), separated on 3% agarose gel (Polish samples) or by capillary gel electrophoresis (German samples) on a CEQ 8000 DNA Analysis System (Beckmann), and sized relative to CEQ DNA Size Standard-400 in each well. Allele sizes were 114 bp for the T allele and 78 bp for the A allele.
Statistical Methods
Hazard ratios (HR) were modeled using Cox proportional hazards regression analysis, with breast cancer as the outcome and age as the time variable (15). We corrected for possible ascertainment bias using a weighted cohort approach (16). Briefly, this involves assigning weights to the mutation-carrying subjects such that the reweighted incidence rates observed in the study sample are consistent with the age-dependent penetrances for breast cancer onset established in carriers of inactivating mutations in BRCA1 and BRCA2. Subjects were followed from birth until the earliest occurrence of breast cancer (3,884), bilateral prophylactic mastectomy (232), ovarian cancer (643), age 80 (97), or age at last contact (2,331). Subjects were censored at age 80 because population-based incidence rates for older mutation carriers are unreliable, and accurate sampling weights cannot be assigned. Carriers with both BRCA1 and BRCA2 mutations were included once in overall analyses and were also included in each of the BRCA1 and BRCA2 gene-specific analyses. The number of subjects in each family varied from 1 to 33, with 75% of families represented by a single individual. Because the exact relationships among the family members were not available, we accounted for the nonindependence of observations within families using a robust variance estimate (17). Primary analyses modeled AURKA as a recessive effect, comparing those with two copies of the minor allele with those with less than two copies. Secondary analyses examined associations using a two degree-of-freedom general model, simultaneously comparing subjects with one copy or with two copies of the minor allele with the subjects with zero copies.
Overall analyses were carried out for all subjects regardless of whether they carried a mutation in BRCA1 or BRCA2 or both. All analyses accounted for birth cohort and country of residence by including them as stratification variables in the Cox regression. The overall analysis also accounted for study site and mutation status. Additional analyses were conducted to obtain risk estimates for individuals with different characteristics, as defined by gene status, menopausal status, oophorectomy status, and study site. Gene-specific results accounted for study site along with birth cohort and country of residence by use of stratification variables. Site-specific results accounted for mutation status, birth cohort, and country of residence. Menopausal status and oophorectomy status were modeled as time-dependent covariates and results accounted for group status and mutation status. In secondary analyses, the influence of benign prophylactic oophorectomy and menopausal status on associations between the Ile/Ile genotype and breast cancer risk was also evaluated. As these covariates did not confound the observed associations, the associations reported in Table 2 are not adjusted for these variables.
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| Results |
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The estimated risk of breast cancer associated with the recessive genotype for F31I in BRCA1 and BRCA2 carriers using a weighted Cox proportional hazards model is shown in Table 2. Although there was a suggestion of a protective effect (HR, 0.91; 95% CI, 0.77-1.06), overall, the result was not statistically significant. Similarly, no association with risk was observed for individual participating centers other than for two centers (Ontario and HEBCS) that contributed small numbers of carriers to the study (Table 2). A test for heterogeneity across study site was not significant (P = 0.06). In an effort to account for the trend toward heterogeneity, we investigated the influence of the three sites that were significantly different from the other sites [MOD-SQUAD (P = 0.02), GEMO (P = 0.01), and DKFZ (P = 0.03)] on the overall effect. Exclusion of each site in turn did not substantially alter the overall HR or the significance of the association.
Because BRCA1 is phosphorylated by AURKA (18), we evaluated whether the Ile/Ile genotype was associated with risk of breast cancer in BRCA1 or BRCA2 carriers. No significant association with risk was detected for either BRCA1 (HR, 0.90; 95% CI, 0.75-1.08) or BRCA2 carriers (HR, 0.93; 95% CI, 0.67-1.29; Table 2). As other studies have reported an association between the recessive Ile/Ile-encoding genotype and postmenopausal status in noncarriers (3, 7), we considered the influence of menopausal status of carriers on breast cancer risk. At the end of follow-up, 4,201 carriers were premenopausal and 2,986 were postmenopausal. No significant association with risk was detected (Table 2). Because prophylactic oophorectomy substantially reduces the risk of breast cancer in BRCA1 and BRCA2 mutation carriers (19), we also evaluated the influence of prophylactic oophorectomy status. A total of 707 individuals reported undergoing prophylactic oophorectomy, 4,298 reported no history of oophorectomy, whereas 2,182 (30%) provided no data at last follow-up. Associations with breast cancer risk by category of prophylactic oophorectomy did not differ markedly from the overall results. Secondary analyses using a two degree-of-freedom general model also failed to detect a significant association for either a single copy (P = 0.97) or two copies (P = 0.24) of the F31I polymorphism compared with no copies.
In an effort to account for possible survival bias and the inclusion of prevalent cases in the collection of BRCA1 and BRCA2 carriers, we repeated our analysis after excluding cases diagnosed more than 3 years before the date of ascertainment. For this analysis, we excluded records where an age at interview was not provided. Overall, the mean difference between age of diagnosis and age at interview for the 3,422 cases with available data was 8.7 years. Of these, 1,322 (38.6%) cases had been diagnosed less than 3 years before the date of ascertainment. When excluding prevalent cases, no association between the Ile/Ile genotype and breast cancer risk was observed, and the risk estimates were similar to those obtained when using both prevalent and incident cases (Table 2).
| Discussion |
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In this study, we accounted for the effects of both bilateral prophylactic oophorectomy and menopausal status effects by treating these factors as time-dependent variables in the analysis. As bilateral prophylactic oophorectomy is known to reduce breast cancer risk by
50% in BRCA1 and BRCA2 mutation carriers (19), we chose to account for the remaining risk of cancer in women undergoing prophylactic oophorectomy by assessing it as an additional time-varying covariate rather than by censoring the follow-up of the women at the time they underwent this procedure. In addition, we did a sensitivity analysis to assess the potential for survival bias in our analyses by restricting the study to women more likely to have incident cases of breast cancer. Although no change in the significance of the results was observed following this approach, it is important to evaluate this possibility in any study, whether single site or multicenter, of individuals at significantly elevated risk of cancer.
This report represents the largest association study conducted to date in BRCA1 and BRCA2 carriers. It also is the first report from CIMBA, an international consortium established to provide sufficient statistical power to test candidate single nucleotide polymorphisms as modifiers of cancer risk in BRCA1 and BRCA2 mutation carriers and to refine breast cancer risk prediction in this population. The operating principles of CIMBA are as follows. (a) CIMBA is open to any group that can contribute genotype and phenotype information on at least 92 BRCA1 and/or BRCA2 mutation carriers. Groups with smaller collections of carriers are encouraged to participate through partnership with a larger group. (b) Phenotypic data obtained from risk factor questionnaires and/or medical records are uniformly coded and stored in a centralized CIMBA database. These data include year of birth, mutation description, ethnicity, country of residence, age at last follow-up, ages at breast and ovarian cancer diagnosis, age at bilateral prophylactic mastectomy, age at bilateral prophylactic oophorectomy, and status and age at menopause. (c) Panels of single nucleotide polymorphisms for genotyping are selected every 6 months at a CIMBA group meeting. (d) Only single nucleotide polymorphisms that show significant associations, either in the published literature or in data available to a member group, at P < 0.01, are considered. (e) Each investigator/group is free to participate or not in any round of genotyping. (f) Genotyping quality control standards must be followed (2% duplicates, call rates >95%, randomized arrangement of affected and unaffected carriers for genotyping). (g) Genotyping data from participating centers are pooled and analyzed as outlined in the CIMBA analysis plan. This study represents the first genetic modifier study conducted by CIMBA using these guidelines.
This study of 7,187 BRCA1 and BRCA2 carriers had 80% power to detect significant (P < 0.05) protective recessive effects with HRs of
0.82 for the F31I allele. We therefore conclude that the present study has a sufficient sample size to assess with reasonable confidence the involvement of the F31I allele in the modification of breast cancer risk among BRCA1 and BRCA2 mutation carries. It also shows the importance of large consortia, such as CIMBA, in evaluating the associations between genetic markers and cancer risk.
| Appendix 1. Study Collaborators |
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GEMO study collaborators: Agnès Chompret, Brigitte Bressac-de-Paillerets, Véronique Byrde, Corinne Capoulade, Gilbert Lenoir, Institut Gustave Roussy, Villejuif, France; Yves-Jean Bignon, Nancy Uhrhammer, Centre Jean Perrin, Clermont-Ferrand, France; Marion Gauthier-Villars, Muriel Belotti, Antoine de Pauw, Dominique Stoppa-Lyonnet, Institut Curie, Paris, France; Laure Barjhoux, Mélanie Léone, Sophie Giraud, Olga Sinilnikova, Hospices Civils de Lyon/Centre Léon Bérard, Lyon, France; Christine Lasset, Valérie Bonadona, Centre Léon Bérard, Lyon, France; Agnès Hardouin, Pascaline Berthet, Centre François Baclesse, Caen, France; Hagay Sobol, Institut Paoli Calmettes, Marseille, France; Florence Coulet, Chrystelle Colas, Florent Soubrier, Hopital Pitié-Salpétrière, Paris, France; Isabelle Coupier, CHU de Arnaud-de-Villeneuve, Montpellier, France; Jean-Philippe Peyrat, Joëlle Fournier, Philippe Vennin, Claude Adenis, Centre Oscar Lambret, Lille, France; Catherine Nogues, Centre René Huguenin, St. Cloud, France; Rosette Lidereau, Institut National de la Sante et de la Recherche Medicale U735, Centre René Huguenin, St. Cloud, France; Danièle Muller, Jean-Pierre Fricker, Centre Paul Strauss, Strasbourg, France; Michel Longy, Institut Bergonié, Bordeaux, France; Christine Toulas, Rosine Guimbaud, Laurence Gladieff, Viviane Feillel, Institut Claudius Regaud, Toulouse, France; Sylvie Mazoyer, Centre National de la Recherche Scientifique UMR5201, Lyon, France; Henry T. Lynch, Creighton University, Omaha, NE; Drakoulis Yannoukakos, National Center for Scientific Research Demokritos, Athens, Greece.
EMBRACE collaborators: Coordinating Centre, Cambridge: Douglas Easton, Antonis Antoniou, Susan Peock, Margaret Cook; North of Scotland Regional Genetics Service, Aberdeen: Neva Haites, Helen Gregory; Northern Ireland Regional Genetics Service, Belfast: Patrick J. Morrison; West Midlands Regional Clinical Genetics Service, Birmingham: Trevor Cole, Carole McKeown; South West Regional Genetics Service, Bristol: Alan Donaldson; East Anglian Regional Genetics Service, Cambridge: Joan Paterson; Medical Genetics Services for Wales, Cardiff: Jonathon Gray; St. James's Hospital and National Centre for Medical Genetics, Dublin: Peter Daly, David Barton; South East of Scotland Regional Genetics Service, Edinburgh: Mary Porteus, Michael Steel; Peninsula Clinical Genetics Service, Exeter: Carole Brewer, Julia Rankin; West of Scotland Regional Genetics Service, Glasgow: Rosemarie Davidson, Victoria Murday; South East Thames Regional Genetics Service, London: Louise Izatt, Gabriella Pichert; North West Thames Regional Genetics Service, Harrow: Huw Dorkins; Leicestershire Clinical Genetics Service, Leicester: Richard Trembath; Yorkshire Regional Genetics Service, Leeds: Tim Bishop, Carol Chu; Merseyside and Cheshire Clinical Genetics Service, Liverpool: Ian Ellis; Manchester Regional Genetics Service, Manchester: Gareth Evans, Fiona Lalloo, Andrew Shenton; North East Thames Regional Genetics Service, London: James Mackay, Anne Robinson; Nottingham Centre for Medical Genetics, Nottingham: Susan Ritchie, Sandy Raeburn; Northern Clinical Genetics Service, Newcastle: Fiona Douglas, John Burn; Oxford Regional Genetics Service, Oxford: Sarah Durell; Department of Cancer Genetics, Royal Marsden Hospital: Ros Eeles; North Trent Clinical Genetics Service, Sheffield: Jackie Cook, Oliver Quarrell; South West Thames Regional Genetics Service, London: Shirley Hodgson; and Wessex Clinical Genetics Service, Southampton: Diana Eccles, Anneke Lucassen.
GCHBOC study collaborators: Beatrix Versmold and Rita Schmutzler, Division of Molecular Gyneco-Oncology, University of Cologne, Cologne, Germany; Christoph Engel, Institute for Medical Informatics, Statistics and Epidemiology, University of Leipzig, Leipzig, Germany; Alfons Meindl, Department of Gynaecology and Obstetrics, Technical University, Munich, Germany; Christian Sutter, Institute of Human Genetics, University of Heidelberg, Heidelberg, Germany; Jurgen Horst, Institute of Human Genetics, University of Muenster, Muenster, Germany; Dieter Schaefer, Institute of Human Genetics, University of Frankfurt, Frankfurt, Germany; Norbert Arnold, University of Schleswig-Holstein, Campus Kiel, Kiel, Germany; Wera Hofmann, Max Delbrück Center for Molecular Medicine, Berlin, Germany; Dieter Niederacher, University of Düsseldorf, Düsseldorf, Germany; Helmut Deissler, University of Ulm, Ulm, Germany; Karin Kast, University of Dresden, Dresden, Germany.
kConFab collaborators: Georgia Chenevix-Trench, Amanda Spurdle, http://www.kconfab.org/Organisation/Members.shtml
MOD-SQUAD collaborators: Michal Zikan, Petr Pohlreich, Zdenek Kleibl, Charles University, Prague, Czech Republic; Lenka Foretova, Machackova Eva, Lukesova Miroslava, Masaryk Memorial Cancer Institute, Brno, Czech Republic.
The LUMC collaborators: Peter Devilee, Maaike P.G. Vreeswijk, Hans F.A. Vasen, H. Meijers-Heijboer, and D. Halley.
HEBCS: Heli Nevanlinna, Johanna Tommiska, Kristiina Aittomaki, Carl Blomqvist, Kirsimari Aaltonen, Anmitta Tamminen, Helsinki University Central Hospital, Helsinki, Finland.
INHERIT BRCAs collaborators: Paul Bessette, Service de Gynécologie, Centre Hospitalier Universitaire de Sherbrooke, Fleurimont, Quebec, Canada; Peter Bridge, Molecular Diagnostic Laboratory, Alberta Children's Hospital, Calgary, Alberta, Canada; Jocelyne Chiquette and Louise Provencher, Clinique des Maladies du sein Deschênes-Fabia, Hôpital du saint-Sacrement, Quebec City, Quebec, Canada; Rachel Laframboise, Service de Médecine Génétique, CHUQ, Pavillon CHUL, Quebec City, Quebec, Canada; Jean Lépine, Centre Hospitalier Regional de Rimouski, Rimouski, Quebec, Canada; Bernard Lespérance and Roxane Pichette, Service d'hémato-oncologie, Hôpital du Sacré-Coeur, Montréal, Quebec, Canada; Marie Plante, Service de Gynécologie, CHUQ, L'Hôtel-Dieu de Québec, Quebec City, Quebec, Canada; and Patricia Voyer, Clinique des maladies du sein, Carrefour de Santé de Jonquière, Jonquière, Quebec, Canada.
MAYO collaborators: Fergus J. Couch, Noralane Lindor, Linda Wadum, Kiley Johnson, Jennifer Mentlick, Janet Olson, Mayo Clinic College of Medicine, Rochester, MN.
| Acknowledgments |
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| Footnotes |
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The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked advertisement in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
48 http://www.kbioscience.co.uk ![]()
Received 2/19/07; revised 4/10/07; accepted 4/23/07.
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