
| HOME | HELP | FEEDBACK | SUBSCRIPTIONS | ARCHIVE | SEARCH | TABLE OF CONTENTS |
Null Results in Brief |
1 Department of Medicine, Vanderbilt Epidemiology Center, Vanderbilt University School of Medicine, Vanderbilt-Ingram Cancer Center, Nashville, Tennessee; 2 Department of Epidemiology, School of Public Health, University of California at Los Angeles, Los Angeles, California; and 3 Department of Epidemiology, Shanghai Cancer Institute, Shanghai, People's Republic of China
Requests for reprints: Xiao Ou Shu, Vanderbilt Epidemiology Center, Vanderbilt University, 6009 Medical Center East, 1215 21st Avenue South, Nashville, TN 37232-8300. Phone: 615-936-0713; Fax: 615-936-1269. E-mail: xiao-ou.shu{at}vanderbilt.edu
| Introduction |
|---|
|
|
|---|
Gly, rs10012), 119 (Ala
Ser, rs1056827), 432 (Leu
Val, rs1056836), and 453 (Asn
Ser, rs1800440) display 2.4- to 3.4-fold higher catalytic efficiency (1, 3-5). Catechol-O-methyltransferase (COMT) catalyzes O-methylation of catechol estrogens (2-OH-E2 and 4-OH-E2) to methoxy-catechol estrogens (2-MeO-E2 and 4-MeO-E2), which have no estrogenic activity. If the methylation step is incomplete, some of these catechol estrogens could induce DNA single-strand breaks, or initiate the carcinogenic process through reacting with DNA and forming depurinated adducts (6). A functional polymorphism in the COMT gene, a G-to-A transition at codon 108/158 in exon 4 (rs4680), has been reported to result in a 3- to 4-fold reduction in COMT activity (7, 8), although another study suggested that the difference in catalytic activity might be less significant (9). Given the importance of CYP1B1 and COMT in estrogen metabolism, it is biologically possible that polymorphisms of these genes that lead to an increase in CYP1B1 activity and a decrease in COMT activity may influence an individual's susceptibility to the risk of endometrial cancer. We tested this hypothesis by examining five putative functional polymorphisms of the CYP1B1 and COMT genes using data from a recently completed population-based case-control study of endometrial cancer conducted in Shanghai, China.
| Materials and Methods |
|---|
|
|
|---|
The allelic discrimination of the CYP1B1 and COMT polymorphisms were assessed with the ABI PRISM 7900 Sequence Detection System (Applied Biosystems, Foster City, CA) using the Taqman genotyping assay with primers and probes obtained from ABI. The Taqman assay method has been described previously (11), and the assay IDs or primers/probes information are listed in Appendix A. The fluorescence level was measured with the ABI PRISM 7900HT sequence detector (Applied Biosystems). Allele frequencies were determined by ABI SDS software. The laboratory staff were blind to the identity of the subjects. Quality control samples were included in the genotyping assays. The concordance rates for the quality control samples were 97.4% (38 of 39) for COMT rs6269 and 100% for all other single nucleotide polymorphisms (SNP).
The
2 test was used to compare the distributions of CYP1B1 and COMT alleles and genotypes in cases and controls. The exact
2 goodness-of-fit test was used to test Hardy-Weinberg equilibrium of the genotypes. Haplotypes were estimated using PHASE software via a Bayesian method (12). Unconditional logistic regression was employed to estimate the odds ratios and 95% confidence intervals for the associations of CYP1B1 and COMT genotypes with endometrial cancer risk. Interactions between gene-gene and genotype-estrogen exposures were evaluated by constructing a multiplicative term in the logistic regression model. All the analyses were adjusted by age. Potential confounding effects from other demographic factors and known endometrial cancer risk factors, such as educational level, body mass index, age at menarche, age at menopause, parity, and oral contraceptive use, were also examined, and no appreciable confounding was observed.
| Results |
|---|
|
|
|---|
The frequencies of alleles and common haplotypes of CYP1B1 and COMT polymorphisms among cases and controls are shown in Table 1 . All CYP1B1 and COMT SNPs were in Hardy-Weinberg equilibrium among both cases and controls. The common alleles in CYP1B1 among controls were 81.7% for rs10012, 87.9% for rs1056836, and 87.9% for rs1056837. Variant alleles at rs1056836 and rs1056837 were in strong linkage disequilibrium (Lewontin's D' = 1.00; correlation, r = 0.99). Among controls, the frequencies of common COMT alleles were 72.8% for rs4680 and 64.1% for rs6269. The most common haplotype for CYP1B1 rs10012, rs1056836, and rs1056837 was C-C-C with the estimated frequencies of 70.5% among cases and 71.5% among controls. Overall, the frequency differences of CYP1B1 and COMT polymorphism and CYP1B1 haplotype between cases and controls were not statistically significant.
|
|
We further explored the joint effect of two SNPs of the COMT gene on endometrial cancer risk. Comparing genotype AA with the GG/AG genotypes for SNP rs4680 among subjects carrying none or one variant allele in rs6269, the odds ratio (95% confidence interval) was 1.29 (0.92-1.82). Among women with none or one variant allele in rs4680, the odds ratio (95% confidence interval) was 1.05 (0.81-1.27) for the GG genotype in SNP rs6269 compared with the AA/AG genotypes. Similarly, using women carrying none or one variant allele in CYP1B1 SNPs rs10012, rs1056836, and rs1056837 as the reference group, odds ratios (95% confidence interval) were 0.77 (0.48-1.23) for women carrying any one of the homozygous variant-type alleles of CYP1B1 SNPs and 0.50 (0.24-1.03) for women carrying any two of the homozygous variant-type alleles. Finally, we examined the potential interactive effect between CYP1B1 and COMT genotypes and no significant interaction was observed.
| Discussion |
|---|
|
|
|---|
Polymorphisms of CYP1B1 have been investigated in relation to breast, ovarian, and endometrial cancers with conflicting results (3, 8, 9, 14, 15). In our large-scale, case-control study conducted in Shanghai, we found that CYP1B1 SNPs in codons 48, 119, and 432 were not associated with breast cancer risk (15). Four epidemiologic studies, mostly conducted in Caucasians, which have investigated CYP1B1 gene polymorphisms in relation to endometrial cancer risk in recent years have resulted in mixed findings (16-19). Rylander-Rudqvist et al. found no overall association between the CYP1B1 codon 48, 119, and 453 genotypes and endometrial cancer risk (16). Similarly, Doherty et al. reported no strong alteration in risk among women with the CYP1B1 codon 432 variant alleles (17). However, in a nested case-control study, McGrath et al. reported that a decreased risk of endometrial cancer was associated with the CYP1B1 codon 453 variant allele (odds ratio, 0.62; 95% confidence interval, 0.42-0.91; ref. 18) but not with the CYP1B1 codon 432 polymorphism. A case-control study that included 113 Japanese endometrial cancer patients and 100 healthy female controls observed a significantly increased risk of endometrial cancer associated with the CYP1B1 codon 119 and 432 polymorphisms (19). Although our results differ from the findings of the small-scale Japanese study (19), our results are consistent with most previous studies (16-18), depicting no association of endometrial cancer risk with CYP1B1 genotypes.
We did not find any association between COMT rs4680 and rs6269 genotypes and the risk of endometrial cancer. Previous studies investigating the relationship of COMT rs4680 genotype and hormone-related cancers have had inconsistent results (9, 15, 17, 18, 20). McGrath et al. did not observe an association between the COMT rs4680 genotype and endometrial cancer (18), whereas Doherty et al. reported that the low-activity allele was associated with a slightly decreased risk of endometrial cancer (17). The inconsistency in study findings may result from the ethnic differences of the study populations and the limitations of the study designs. One recent study also suggested that other functional variations, especially regulatory variations, might exist and that COMT haplotypes could be used to ascertain the effect of COMT on disease etiology (21). Results from another study showed that CpG hypermethylation could selectively inactivate COMT, leading to the accumulation of catechol estrogens and promotion of endometrial carcinogenesis (22).
Chinese women typically have a low level of circulating estrogen (23), which might mask the effect of estrogen metabolic gene polymorphisms. We conducted analyses among women with conditions related to a high level or long period of estrogen exposure, such as women with high body mass index/waist-hip ratio and longer durations of menstruation. However, we failed to find any gene-environment interactions with the above factors.
Strengths of this study include the population-based study design and large sample size, which minimized selection bias and led to relatively stable risk estimation. The detailed exposure information enabled an evaluation of gene-environment interactions. Nevertheless, the statistical power in subgroups of our study remained limited due to the low frequencies of variant alleles, which prevented our ability to identify weak associations. The study applied the candidate gene approach, which primarily focuses on the potential function of common genetic variants (>5%) and SNPs with amino acid changes. However, we cannot rule out the possibility that SNPs of CYP1B1 and COMT other than those included in our study may be related to the risk of endometrial cancer. Given that multiple genes are involved in estrogen biosynthesis and metabolism (24, 25), the confounding and/or modifying effects of other genes also cannot be excluded.
In summary, we found no strong evidence that common polymorphisms of the CYP1B1 and COMT genes play a major role in the development of endometrial cancer among Chinese women.
Appendix A. Summary of the genotyping assays of CYP1B1 and COMT polymorphisms
|
Abbreviations: F: forward; R: reverse.
| Acknowledgments |
|---|
| Footnotes |
|---|
The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked advertisement in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
Received 6/14/06; revised 9/15/06; accepted 10/10/06.
| References |
|---|
|
|
|---|
This article has been cited by other articles:
![]() |
S. L. Deming, W. Zheng, W.-H. Xu, Q. Cai, Z. Ruan, Y.-B. Xiang, and X.-O. Shu UGT1A1 Genetic Polymorphisms, Endogenous Estrogen Exposure, Soy Food Intake, and Endometrial Cancer Risk Cancer Epidemiol. Biomarkers Prev., March 1, 2008; 17(3): 563 - 570. [Abstract] [Full Text] [PDF] |
||||
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| HOME | HELP | FEEDBACK | SUBSCRIPTIONS | ARCHIVE | SEARCH | TABLE OF CONTENTS |
| Cancer Research | Clinical Cancer Research |
| Cancer Epidemiology Biomarkers & Prevention | Molecular Cancer Therapeutics |
| Molecular Cancer Research | Cancer Prevention Research |
| Cancer Prevention Journals Portal | Cancer Reviews Online |
| Annual Meeting Education Book | Meeting Abstracts Online |