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Department of Medicine and Therapeutics, Institute of Medical Sciences, University of Aberdeen, Foresterhill, Aberdeen, United Kingdom
Requests for reprints: Emad El-Omar, Department of Medicine and Therapeutics, Institute of Medical Sciences, Foresterhill, Aberdeen AB25 2ZD, United Kingdom. E-mail: e.el-omar{at}abdn.ac.uk
| Abstract |
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| Introduction |
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The beneficial association between NSAID use and decreased risk of colorectal cancer also provided further evidence to suggest a role for chronic inflammation in the pathogenesis of sporadic colorectal cancer. In the case of chronic inflammation in the gastric mucosa, it is known that a proinflammatory cytokine gene profile increases the risk of malignant progression (4). A recent study has shown that common polymorphisms in a number of inflammatory genes are also associated with sporadic colorectal cancer risk (5). This was the first report to suggest that genes encoding interleukin (IL)-6, IL-8, and proliferator-activated receptor-
are important in relation to inflammation-related risk of sporadic colorectal cancer. It is possible that genetic variants in other genes controlling the inflammatory response will influence risk of colorectal cancer and, moreover, that they will modify the effects of other factors, such as NSAIDs, that act on this response.
IL-1ß and tumor necrosis factor
(TNF
) are prototypical proinflammatory cytokines that have a number of functional polymorphisms. The IL-1B-31 T to C single nucleotide polymorphism (SNP) and the TNF-A-308 G to A SNP have been shown to be functionally significant with the C allele of IL-1B-31 and the A allele of TNF A-308 being associated with increased production of their respective cytokines (6, 7). In Helicobacter pyloriinduced gastritis, these proinflammatory alleles are associated with an increased risk of gastric cancer (4).
Transforming growth factor-ß (TGF-ß) is an important immunoregulatory cytokine within the gastrointestinal tract and this is shown in TGF-B gene knockout mice, which proceed to develop uncontrolled gastrointestinal inflammation (8). The 800 (G to A) and 509 (C to T) SNPs of the TGF-B1 gene are in linkage disequilibrium and the 509 T allele has been related to a higher plasma concentration of the cytokine and a higher level of transcriptional activity than the 509 C allele (9). A gene dose effect has been observed for the T allele so that individuals homozygous for 509 T/T were found to have higher plasma concentrations of TGF-ß1 than heterozygous C/T and homozygous C/C individuals (9). It could be postulated that having the 509 T allele is protective against colorectal cancer. There are no published reports of this SNP in relation to colorectal cancer.
IL-10 is a Th2 anti-inflammatory cytokine that plays a crucial role in modulating gastrointestinal tract inflammation (10). The IL-10deficient mouse develops atrophic gastritis, chronic enterocolitis, and ultimately colorectal cancer (11). Promoter SNPs exist at positions 1082 (G/A), 819 (C/T), and 592 (C/A) of the IL-10 gene on chromosome 1. The 819 and 592 loci are in total linkage disequilibrium and together the three loci form three haplotypes (GCC, ACC, and ATA) that have been associated with greater or lower IL-10 production. The 1082 IL-10 A allele has been associated with the production of reduced levels of the protein in stimulated cells with the ATA haplotype leading to low IL-10 expression and the GCC haplotype high IL-10 expression (12). However, several contradictory studies have been published and the functional consequences of these haplotypes remains uncertain (13-15). Gibson et al. (16) identified additional SNPs in the IL-10 promoter in Europeans and found that distal SNP haplotypes also associate with quantitative IL-10 production. The low ATA IL-10 haplotype is associated with an increased risk of gastric adenocarcinoma and this may be related to the role of IL-10 as an anti-inflammatory cytokine that down-regulates IL-1ß, TNF-
, IFN-
, and other proinflammatory cytokines (4). It is presently unknown whether the ATA IL-10 haplotype is also a risk factor for colorectal cancer.
Our aims were thus to evaluate the role of these proinflammatory cytokine gene polymorphisms, namely IL-1B (31 T/C), TNF-A (308 G/A), TGF-B (509 C/T), and IL-10 (592 C/A, 1082 G/A) in colorectal cancer and to investigate their interaction with aspirin use in a population with a relatively high incidence of the disease.
| Subjects and Methods |
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Subjects were approached by mail and asked to provide a mouthwash DNA sample and to complete a semiquantitative food frequency questionnaire (which had previously been validated in the local population; ref. 18). Part two of the questionnaire collected information on risk factors for colorectal cancer, including smoking habits, alcohol intake, physical activity, and family history of inflammatory bowel disease or colorectal cancer. Data was also collected to enable subjects to be stratified into social class based on occupation, according to the Registrar General's social scale (Appendix 1). With regard to NSAID use, subjects were asked whether they were presently taking, or had ever taken, aspirin regularly, which was defined as every day for a month or more. Two hundred and sixty-four of 423 eligible cases (62%) and 408 of 670 eligible controls (61%) either provided a DNA sample or completed questionnaires, or both. All subjects gave informed written consent and the study was approved by the Joint Ethics Committee of Grampian Health Board and Aberdeen University.
SNP Selection
We assessed a total of five SNPs: IL-1B (31 T/C), TNF-A (308 G/A), TGF-B (509 C/T), and IL-10 (592 C/A, 1082 G/A). As the 819 IL-10 SNP is in total linkage disequilibrium with 592 SNP, we omitted it from analysis. The SNPs have all been shown to confer functional changes in their respective genes and have been positively associated with a number of other diseases in previous case-control studies (19). Moreover, all the genes have relevance to inflammation and carcinogenesis, particularly within the gastrointestinal tract.
SNP Genotyping
DNA was extracted from exfoliated buccal cells using a protocol adapted from the Elucigene CF12 kit (Zeneca Diagnostics, Abingdon, United Kingdom). The only modification was the final step, which involved transferring supernatant to a 1.5 mL microfuge tube. SNPs were discriminated by 5' nuclease PCR assays (TaqMan). Primers (Operon Technologies, Inc., Alameda, CA) and probes (Applied Biosystems, Foster City, CA) for all except TGF-B were those designed and used successfully in previous studies (4, 20). Reactions were run in 96-well plates and read in an ABI 7700 sequence detection system (Applied Biosystems). The sequences of the primers and probes used in the TaqMan assays are reported in Appendix 2.
Data Analysis
The Pearson
2 test was used to assess, for each polymorphism, whether the frequencies in the control subjects were in Hardy-Weinberg equilibrium. For each individual polymorphism, logistic regression was used to compute genotype odds ratios (OR) and 95% confidence intervals (95% CI) using STATA 7.0 (StataCorp, 2001), adjusting for age at diagnosis (for controls; grouped as <55, 55-64, 64-74, and 75 years and older) and sex. Homozygosity for the common allele was set as the reference category. Analyses were done for all colorectal cancers combined and for colon and rectal tumors separately. To explore possible heterogeneity in effects by age or sex, the analyses of all colorectal tumors were repeated by stratifying by sex and age (<65,
65).
Polymorphisms were also combined into pairs of proinflammatory or anti-inflammatory cytokines, e.g., IL-10-1082 and IL-10-592 were analyzed together, as were TNF-A and IL-1B. This was to investigate whether joint effects or a proinflammatory profile increased ORs. For each pair of polymorphisms, subjects were classified as homozygous wild-type (for both polymorphisms), single heterozygous (heterozygous for one of the polymorphisms, but not for both), double heterozygous (heterozygous for both polymorphisms), or homozygous variant (homozygous for both of the polymorphisms).
It is possible that the polymorphisms of interest might be associated with risk factors for colorectal cancer in the population at risk for the disease. Therefore, several risk factors for colorectal cancer were considered as potential confounders of the relationship between each of the polymorphisms and colorectal cancer; these were body mass index, physical activity, social class, alcohol intake, total energy intake, and smoking status. Each was fitted in turn to the age-sexadjusted logistic model. None made a statistically significant contribution. Therefore, the results are adjusted for age and sex only.
Joint effects of genotype and regular use of aspirin were explored by computing ORs for combinations of genotype and aspirin use. For these analyses, subjects who were heterozygous or homozygous for the variant were analyzed together, and the reference category comprised subjects who were homozygous for the common allele and had never used aspirin regularly. The change in deviance (2 x log likelihood) between the main effects model and the model that included an interaction term was computed as a test for interaction.
| Results |
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| Discussion |
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It might be postulated that individuals who are genetically prone to producing reduced levels of the anti-inflammatory IL-10 (i.e., carriers of the variant A allele) are more likely to benefit from the anti-inflammatory properties of aspirin. Ideally, we would have liked to examine all three IL-10-592 genotypes separately rather than combining heterozygotes and homozygotes, but this was not possible due to sample size. In addition, it would have been more relevant to focus on combinations of polymorphisms with aspirin use but this was precluded by the low numbers. We did have information on use of other types of NSAIDs (including ibuprofen, diclofenac, and mefenamic acid) in our subjects. Current or past use of these on a daily basis for at least 1 month was associated with a decreased risk of colorectal cancer overall (22). There was no evidence that the effect was modified by IL-10-592 genotype.
The cytokine polymorphisms investigated in this study were selected on the basis of functional data relating to their potential role in inflammation and, with the exception of TGF-B, their role in the classic example of inflammation-mediated carcinogenesis that is gastric adenocarcinoma. The first proinflammatory cytokine shown to be relevant in the development of H. pyloriassociated gastric adenocarcinoma was IL-1ß (20). The IL-1B-31 (T/C) polymorphism also involves a TATA sequence in the IL-1B promoter that has been shown to affect DNA-protein interactions in vitro (20). Thus, the presence of this proinflammatory polymorphism in colorectal cancer cases and controls was a pertinent question and one that we are not aware of other investigators having considered.
The second polymorphism that we investigated was TNF-A-308 G/A. This locus has been the most investigated in association studies of TNF-
and disease (23). Our finding of no association between colorectal cancer and the 308 promoter polymorphism is consistent with that of Park et al. (24). However, the population in the study of Park et al. was Korean and the TNF-A-308 A allele seems to be present only in 2% to 5% of Asian populations, compared with 15% to 25% of populations in Europe and North America (25). Thus, it is possible that the Korean study lacked power to detect an association. In addition, there exist at least a further 11 promoter region SNPs, so the possibility of an association between colorectal cancer and an alternative promoter polymorphism cannot be ruled out.
It has been estimated that >80% of colorectal tumors have inhibitory mutations in the TGF-ß pathway (26). Based on this and the fact that the T (variant) allele of the 509 (C/T) promoter SNP leads to higher plasma concentrations of the cytokine, we were interested to examine the association between colorectal cancer risk and this SNP. To our knowledge, this is the first study investigating TGF-ß promoter polymorphisms and colorectal cancer. Our finding of no significant association may be related to the sample size.
Despite considerable evidence demonstrating the importance of IL-10 as an anti-inflammatory cytokine with a pivotal role in the gastrointestinal tract, there are no published studies investigating polymorphisms in the gene and risk of colorectal cancer. In noncardia gastric carcinoma, the adjusted OR for low IL-10 homozygotes (ATA) was 2.5 (1.1-5.7; ref. 4). We did not look at the 819 SNP but as the three promoter polymorphisms (1082, 819, 592) are in linkage disequilibrium, we were able to look at joint effects of the 1082 and 592 SNPs. The lack of any statistically significant association could again be explained by our sample size. It is also possible that other functional IL-10 polymorphisms reported in the literature may be relevant (16).
In addition to finding no significant associations between the individual polymorphisms and colorectal cancer, the study did not find any significant association between colorectal cancer and combinations of SNPs. Having multiple proinflammatory or anti-inflammatory cytokine polymorphisms has been shown for noncardia gastric cancer to progressively increase the risk of disease (4). The ORs increased from 2.8 to 26.3, with up to four proinflammatory polymorphisms. This suggests that it is the overall balance between proinflammatory and anti-inflammatory cytokine activity that has more impact on cancer risk than variation at a single locus. Furthermore, the fact that the cytokines have a complex and overlapping range of activities that occur at varying time points in inflammation and tumorigenesis makes it difficult to isolate individual polymorphisms. In this study, we did not have the statistical power to investigate combinations of more polymorphisms. Moreover, a statistical framework for analyzing this complex type of interaction is currently lacking (27). Although our numbers of cases and controls were higher than in the few previous studies investigating TNF polymorphisms and colorectal cancer, sample size is probably the main limitation of this study (24). This is particularly true for the subgroup analyses of colon and rectal tumors separately and the analyses of interactions. It is also possible that our null findings with regard to the main effects of IL-1B-31, TNF-A-308, IL-10-1082, IL-10-592, TGF-B-509 were due to limited statistical power. Confirmation of our findings, both positive and null, is needed in large population-based studies in other populations. Studies with sufficient sample size to investigate colon and rectal tumors separately would be particularly valuable.
The response rate in cases (62%) and controls (61%) was virtually identical. Whereas these are lower than in a previous case-control study of colorectal cancer and cytokine polymorphisms, our study was population based (5). It has been noted that participation rates in research seem to be declining (28). In this study, other than refusal, the main reasons for nonparticipation among cases were death (n = 37, 8.7% of those eligible) or General Practitioner refusal of permission to contact subjects (n = 15, 3.5%), which was mainly because subjects were deemed to be too ill. For controls, the General Practitioner refused permission to approach 16 individuals and a further 8 had died (3.6% in total). If genotype was associated with survival, either of cases or controls, bias could result from the nonparticipation of deceased, or very ill, subjects. There seems to be no evidence that the cytokine polymorphisms under investigation here are associated with survival. We were able to compare a limited number of sociodemographic characteristics of participants and nonparticipants. Participating cases were slightly younger, more likely to be male, and less likely to have had a previous cancer than cases who declined to take part. There were no significant differences in sex or age of participating and nonparticipating controls. Among cases, a higher proportion of participants (67%) than nonparticipants (56%) were resident in the least-deprived areas of Grampian. A similar but less pronounced pattern was evident among controls. This would be consistent with a modest social class bias in participation. Subjects approached to take part in the study were not aware of the study hypotheses, either with regard to use of aspirin or genotype. As regards aspirin, 22% of controls reported current or past daily use for a period of at least 1 month. Although aspirin is the most frequently dispensed drug in Scotland, data are lacking on the prevalence of regular use in the population (29). Fourteen percent of 10,000 individuals registered with a General Practitioner in the United Kingdom, ages 40 to 79 years in 1994 to 1997, and free from cancer or colorectal adenoma either had a current prescription for aspirin or had had one in the past (30). This did not include use of aspirin obtained over the counter. It is possible, therefore, but not clear, whether participating controls were biased with regard to aspirin use. As regards genotype, the prevalence among controls of the homozygous variant genotype for each SNP was similar to that reported in other populations of European origin and the genotype frequencies conformed with Hardy-Weinberg equilibrium (4, 31). It seems highly unlikely, therefore, that participation would have been biased by genotype.
In conclusion, while this study did not reveal significant associations between the cytokine polymorphisms of IL-1B-31, TNF-A-308, IL-10-1082, IL-10-592, TGF-B-509 and colorectal cancer, a statistically significant reduction in colorectal cancer risk was shown for carriers of the IL-10-592 mutant (A) allele who had taken aspirin on a regular basis. These individuals may fall into the category of low IL-10 producers and it is possible that they may, therefore, derive more benefit from the exogenous anti-inflammatory aspirin. Larger studies in other populations are required to investigate this further. Our findings suggest that host genetic factors may play a role in predicting response to chemopreventive agents. In the design of future chemoprevention trials for colorectal and other cancers, the importance of pharmacogenomics should not be underestimated.
| Appendix 1. Social class based on occupation |
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| Appendix 2. Probes and primers used for SNP genotyping |
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| Footnotes |
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The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked advertisement in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
Received 11/30/04; revised 3/30/05; accepted 4/28/05.
| References |
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, NFKB1, and peroxisome proliferator-activated receptor
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(IL-1
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statistic. Public Health Nutr 2003;6:31321.[CrossRef][Medline]
promoter-random variation or functional diversity? Mol Immunol 1999;36:101727.[CrossRef][Medline]
, interleukin-10, interferon-
and interleukin-2 genes in a North European Caucasoid group from the UK. Eur J Immunogenet 2000;27:2419.[CrossRef][Medline]
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